Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918573.1_cds_XP_016468005.1_60694
CDS Infomation

[gene=LOC107790575] [db_xref=GeneID:107790575] [protein=protein JASON-like] [protein_id=XP_016468005.1] [location=complement(join(32845..32919,33012..34068,34162..34197,34291..34388,34941..35024))] [gbkey=CDS]
Sequence

ATGGGTTGTTTTCTTGGGTGTTTTGGTGGTGATAAGGACAAGAAACGTCGCAAACAGAGG
CACAAAGTCATCCCTCGAGACCAAAAACATGTCTGTAGGGATCCTCCAAAAAGCACCATC
ACCGCTGAACAAAGCATCATAGAGGAGGAACCCTTCTCTGAGAACTTGGTTGCGGAAGCA
CGAGATGATCTGTCTCGGAACTTGGTTGCAGAAGCACAAGATAGGTCTGAGGAACAACTG
AGCTTGAGTGCTAGAAAAAGAGTTACCTTTGATTCAAAGGTCACTACATATGATCCTGTT
TCAATCTATGAAAGTACAGATTCTTTACCCGAAACCAAGAAAGCTGGTGAAAACGAAGAA
GAGGAGGGTTGCCTTGCTAAATCAAGCCAGTCCAACTCTTCCTCTGAAGGGGGTTCAGCC
ATATCTAGTGTTGGATCATACCCTCCAAACCACAGGTATCAGAACTGCAGAGACAGTGAT
GATGAGGCTGAGGATTTTGCTGACAGTGACTTGGACGACGAATGTGATCTAGATGATGAA
GACTGCGGCGGGGATTCCGATTGTGATGGTGGACTTCAAGTGTGGTCTGAATCTGTGGTA
ACTGCATCAGTGGGATCTAAGGCTGATGATAAGTCCTTTCATCTAGTGAATGAAGAGGAG
GAAGTGGATAGTCCTGCGATGTTTGGCGTGCCTGAGAAGGAAATGAGAAAGGGCGAAACA
AAAGGATATGTAAGAGATAGGAGTGCTTATATCCATCCTGTGTTGAACCCTGTGGAAAAC
CTCAGTCAGTGGAAAACTATTAAATCTAAAGCGGCAGAACCCTTGAAGATGCTGCCACAG
AAGGAAAATTTTATCGCAGAAGTAGAAGGGCCTCTTGCTTCATTCAGTTTAGAACCGACA
TTTAAGCAATCATCGTCATCTAGTTTCAGGCCAAAGTCTAAGGATCAAGAAATTGGAGTT
GATGCTAGTCTCTCAAATTGGTTGGTTACTACACCTGACAATACTAAGAAGGCTGGCTCA
GAAAAGAGCATGTCACAAGGTTCCAACTCTATGATGAGCTTTGAAGACAGACCGATTTTA
GGTGCCTTGACAGTTGAGGAGCTGAAACAGATGTCAGCGTCTTCCTCCCCAAGGAAATCA
CCCAGTCGGAGCCCTGATGATATGCCTATCATAGGAAGTGTTGGGACCTATTGGAATCCA
TCTGGATCCACAAAGGACTCCGGGTCAGTTTCTTCTTTTAAAGGCATTCCAAACTCAACC
AGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCATTCAACTCCATTTGAGACAAGACTG
GACAGAGCCTTGAAACAAGGTGCTGCATAA

Peptide Sequence

PEP ID

XP_016468005.1
PEP Infomation

PREDICTED: protein JASON-like [Nicotiana tabacum]
Sequence

MGCFLGCFGGDKDKKRRKQRHKVIPRDQKHVCRDPPKSTITAEQSIIEEEPFSENLVAEA
RDDLSRNLVAEAQDRSEEQLSLSARKRVTFDSKVTTYDPVSIYESTDSLPETKKAGENEE
EEGCLAKSSQSNSSSEGGSAISSVGSYPPNHRYQNCRDSDDEAEDFADSDLDDECDLDDE
DCGGDSDCDGGLQVWSESVVTASVGSKADDKSFHLVNEEEEVDSPAMFGVPEKEMRKGET
KGYVRDRSAYIHPVLNPVENLSQWKTIKSKAAEPLKMLPQKENFIAEVEGPLASFSLEPT
FKQSSSSSFRPKSKDQEIGVDASLSNWLVTTPDNTKKAGSEKSMSQGSNSMMSFEDRPIL
GALTVEELKQMSASSSPRKSPSRSPDDMPIIGSVGTYWNPSGSTKDSGSVSSFKGIPNST
SKYREDKRVNWHSTPFETRLDRALKQGAA

Transcript Sequence

Gene sequence data has not been registered.